Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTACACTTGCAGTTGTT
..((((((((((.(((((...&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143816
GeneSymbolBDNF
Binding site677,694
Score0.969
Seed1
Au0.75
Energy-18.0
Binding len17
Me-6.246
Phylopstem0.5241412299999999
Phylopflank1.1476807637500002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure