Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAGGTGATGCCAGGG
.((((((((.((.(((......&)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143820
GeneSymbolETS1
Binding site3002,3018
Score0.846
Seed1
Au0.485
Energy-17.5
Binding len16
Me-6.325
Phylopstem5.0015325
Phylopflank2.502176949
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure