Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATTGCAGCTGTG
..((((((((((((...(((.&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143824
GeneSymbolSLC38A4
Binding site1568,1584
Score1.0
Seed1
Au0.574
Energy-20.3
Binding len16
Me-5.925
Phylopstem0.3515630916666667
Phylopflank0.36494490975000005
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure