Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCTGCT
..(((((((.(((........&)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143829
GeneSymbolCCDC68
Binding site2693,2704
Score1.0
Seed1
Au0.618
Energy-17.2
Binding len11
Me-8.025
Phylopstem0.5659355442857142
Phylopflank0.05500060962499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure