Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGCACAAGCAGCTGCAGC
((((((((((...(((..(((&)))..)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143835
GeneSymbolNFRKB
Binding site2171,2193
Score0.846
Seed1
Au0.529
Energy-23.5
Binding len22
Me-11.398
Phylopstem1.7367055999999998
Phylopflank4.99112366375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure