Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCCAGTATGAATGCTGCTGTGTCCAAGACTGTAGCTGTG
..((((((((((((((((((.&)))))).........................)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143835
GeneSymbolNFRKB
Binding site3572,3616
Score0.846
Seed1
Au0.426
Energy-22.9
Binding len44
Me-4.957
Phylopstem3.777091841860465
Phylopflank4.089459535
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure