Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCATCTGTTCTTAACCTCAACTGCAGCC
.....((((((((((..((((&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143837
GeneSymbolNOX4
Binding site584,618
Score0.846
Seed0
Au0.5
Energy-20.7
Binding len16
Me-13.899
Phylopstem-0.11595342999999995
Phylopflank0.31033544
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure