Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCTTCTGCAGGGCT
..((..((((((..((((((.&))))))..)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143837
GeneSymbolNOX4
Binding site4413,4431
Score0.923
Seed0
Au0.647
Energy-18.8
Binding len18
Me-13.123
Phylopstem0.30222583333333336
Phylopflank0.05351723749999999
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure