Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATTCCGCTGCTGCT
..(((((.((((.(((.....&)))..)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143843
GeneSymbolTMEM106C
Binding site148,164
Score0.846
Seed0
Au0.382
Energy-19.4
Binding len16
Me-8.56
Phylopstem1.9138217999999998
Phylopflank0.61051878025
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure