Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCTGCGGCCCAGCTC
....(((((.(((((((((((&))))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143853
GeneSymbolPYM1
Binding site741,760
Score0.846
Seed0
Au0.382
Energy-19.7
Binding len19
Me-10.789
Phylopstem2.194689307692308
Phylopflank2.733827184875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure