Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAACAACCGCCTGCAT
.(((((..((((((((..(((&))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143854
GeneSymbolRPH3A
Binding site791,809
Score0.846
Seed0
Au0.471
Energy-21.6
Binding len18
Me-7.651
Phylopstem3.89035
Phylopflank5.6373845125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure