Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGCACTTCACGTTGCAGCTGCT
..(((((((((((((((....&)))))).........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143886
GeneSymbolPPP1R12A
Binding site477,502
Score0.846
Seed1
Au0.588
Energy-20.8
Binding len25
Me-4.957
Phylopstem3.522777672083333
Phylopflank3.504966060375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure