Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGCCCAGCTGTG
..(((((((.(((..(((((.&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143888
GeneSymbolBSDC1
Binding site2064,2080
Score0.923
Seed1
Au0.426
Energy-20.2
Binding len16
Me-7.792
Phylopstem7.841304285714286
Phylopflank5.4245544325
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure