Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTACCATCGCAGCC
.....((((((((.(((((((&)))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143889
GeneSymbolBSDC1
Binding site168,186
Score0.846
Seed0
Au0.353
Energy-20.0
Binding len18
Me-14.522
Phylopstem0.8527040499999999
Phylopflank0.7983289599999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure