Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTATTTTAATTAACTTTAGTATGAAAATCACTTGTCATGCCAGGC
.((((((((((((.((.(((((&.))))))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143890
GeneSymbolBSDC1
Binding site2878,2927
Score0.808
Seed1
Au0.588
Energy-21.0
Binding len22
Me-4.65
Phylopstem5.630948746153846
Phylopflank4.198981376587501
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure