Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCAGCTGCACTGGGC
.(.(((.(((((((((((((.&))))).))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143890
GeneSymbolBSDC1
Binding site2579,2599
Score0.846
Seed0
Au0.368
Energy-20.9
Binding len20
Me-6.895
Phylopstem2.287653657142857
Phylopflank2.378947381249999
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end7
Position3UTR
2D Structure