Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCCTTGTGTGCCGA
...((((((((((.(.(((...&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143906
GeneSymbolTRAFD1
Binding site2039,2055
Score0.846
Seed0
Au0.382
Energy-16.2
Binding len16
Me-7.604
Phylopstem1.1601572
Phylopflank0.49194460687499997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure