Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTTGGGTTTGAGGGAAGGGAGCAGGGTG
..(((((((..(((((((...&.)))))))..))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001143906
GeneSymbolTRAFD1
Binding site2513,2543
Score1.0
Seed1
Au0.397
Energy-30.1
Binding len18
Me-9.024
Phylopstem2.252557142857143
Phylopflank0.8486843
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure