Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCAACAGGCTGCAAG
((((((((...(((((((((.&))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143906
GeneSymbolTRAFD1
Binding site1623,1642
Score0.923
Seed1
Au0.544
Energy-22.6
Binding len19
Me-9.061
Phylopstem0.4608181333333332
Phylopflank1.11478404
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure