Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGAAAGCAGCTAGGCC
..((((((((..(((.(((((&))))))))..))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143909
GeneSymbolRPEL1
Binding site276,297
Score0.923
Seed1
Au0.485
Energy-19.0
Binding len21
Me-11.362
Phylopstem2.2451122999999997
Phylopflank2.7575145974999993
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure