Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCAC
.((((((((((((....((((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143917
GeneSymbolLYSMD2
Binding site661,705
Score1.0
Seed1
Au0.588
Energy-23.1
Binding len18
Me-5.619
Phylopstem4.790448966666666
Phylopflank3.092317233750001
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure