Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACTAACCGTCAAGTAATCCACATTGCAGA
(((((((((((((((((((((&))))))).))))))..))).........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143938
GeneSymbolZNF534
Binding site762,796
Score0.846
Seed1
Au0.603
Energy-20.8
Binding len34
Me-3.938
Phylopstem-1.043691912121212
Phylopflank-0.6713675675000002
Longest consecutive pairings7
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure