Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGGAGCTTGAGGCTGCAGT
((((((((..((((.(.((((&)))).).))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143939
GeneSymbolZNF534
Binding site4178,4201
Score0.846
Seed1
Au0.485
Energy-20.3
Binding len23
Me-6.972
Phylopstem-0.7313952625
Phylopflank-0.043480535000000056
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure