Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTTGGTGCTGGCTGCAAC
(((((((((((.(.((((((.&))))))..).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143940
GeneSymbolLGSN
Binding site864,887
Score0.923
Seed1
Au0.485
Energy-23.3
Binding len23
Me-8.141
Phylopstem-0.2622960916666666
Phylopflank0.15074501875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure