Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTATCAGGCTCTTCTCATGGTATGAGCACCGCAGCTTGCT
..((((((((((.(((.....&.))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143943
GeneSymbolEFCAB2
Binding site2840,2883
Score1.0
Seed1
Au0.485
Energy-21.1
Binding len16
Me-6.246
Phylopstem-0.15944830272727273
Phylopflank0.18257413975000003
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end3
Position3UTR
2D Structure