Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCAGAGCCAGAAGGATCATTTTAAGAGCCAGGCTGAGGAGCTGCAGA
((((((((.(....((..(((&.)))..))...).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143975
GeneSymbolUBTFL1
Binding site783,832
Score0.846
Seed1
Au0.544
Energy-18.1
Binding len22
Me-13.312
Phylopstem2.874680625
Phylopflank2.5235145525
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure