Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACGTTGAGCTTCTGCCGGGTT
((((((((..((((((......&))))))......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143979
GeneSymbolNDE1
Binding site2229,2250
Score0.846
Seed1
Au0.456
Energy-16.1
Binding len21
Me-6.236
Phylopstem5.035432
Phylopflank2.7594328724999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure