Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTGCAGCTGGAC
.(.(((((((((((.......&))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143981
GeneSymbolCHRDL1
Binding site1527,1541
Score0.923
Seed0
Au0.559
Energy-19.5
Binding len14
Me-6.319
Phylopstem-0.2631133909090909
Phylopflank0.19816126625000005
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end1
Position3UTR
2D Structure