Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATGGGTTGGTTTACTGCGTGAACTGCATCTGCT
..((((.((((((((((((((&)))))))..................))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143982
GeneSymbolCHRDL1
Binding site272,310
Score0.846
Seed0
Au0.515
Energy-19.8
Binding len38
Me-6.501
Phylopstem0.34251703125000005
Phylopflank1.0269668024999998
Longest consecutive pairings7
Position of longest consecutive pairings31
Pairings in 3prime end8
PositionCDS
2D Structure