Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTATCCTCAAAAAATAGACGGAAAATGCTGCAAGGTGTGTCCAGGTA
(((((((((((..(((((((((&.)))).)))))..))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143983
GeneSymbolCHRDL1
Binding site795,844
Score0.923
Seed1
Au0.603
Energy-23.4
Binding len26
Me-8.574
Phylopstem0.474892575
Phylopflank0.055722493750000046
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure