Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAGCCGAGTCAGATGTC
..(((.(((((((((((((((&))))))))))))...))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143983
GeneSymbolCHRDL1
Binding site326,349
Score0.923
Seed0
Au0.529
Energy-20.3
Binding len23
Me-6.858
Phylopstem0.4076429222222222
Phylopflank0.58358733
Longest consecutive pairings12
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure