Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCCTCGGCAGCTGG
...(((((((.(..((((((.&))))))..).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143984
GeneSymbolPTPMT1
Binding site293,311
Score0.846
Seed0
Au0.382
Energy-21.4
Binding len18
Me-11.485
Phylopstem3.3054787142857145
Phylopflank1.6606854737499999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure