Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGGAGTCCGCAGCTGCT
..((((((((((((((.....&))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143987
GeneSymbolNBPF6
Binding site2439,2458
Score0.846
Seed1
Au0.426
Energy-22.4
Binding len19
Me-4.957
Phylopstem-0.45803297066666665
Phylopflank-0.26350240875000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure