Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCGGCGCAGCTCGTG
..(((((((((.(.((((((.&)))))).).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143995
GeneSymbolLPXN
Binding site265,285
Score0.923
Seed1
Au0.515
Energy-23.1
Binding len20
Me-9.161
Phylopstem-0.29691375400000003
Phylopflank-0.10249135199999998
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure