Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGAGGCCCGGCCGCAGCGCAGG
((((.((((((((((...(((&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144
GeneSymbolAMFR
Binding site158,185
Score0.846
Seed0
Au0.206
Energy-24.5
Binding len19
Me-8.29
Phylopstem0.2109199
Phylopflank2.5507764162500006
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure