Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGGCTGCAGCC
.....(((((((((...((((&))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144012
GeneSymbolTMX2
Binding site863,879
Score0.846
Seed0
Au0.529
Energy-20.0
Binding len16
Me-14.634
Phylopstem2.300322111111111
Phylopflank0.34411616125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure