Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAACCTGCTCTGCT
..((((..(((((((.(((((&)))))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144013
GeneSymbolRGPD3
Binding site1833,1852
Score0.846
Seed0
Au0.544
Energy-20.6
Binding len19
Me-9.047
Phylopstem2.0499030875
Phylopflank3.3763526762500002
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure