Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGCGGCTGCCGGAGTTCGGGGAAGTTGTGGCTGTCGAG
(((((((((((((((((.(((&))).)))))))))...................))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144058
GeneSymbolNTM
Binding site103,145
Score0.923
Seed1
Au0.368
Energy-21.0
Binding len42
Me-3.938
Phylopstem-0.4126701972972972
Phylopflank0.36581089
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end7
Position5UTR
2D Structure