Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCGGCTGCAC
.(((((((((((.........&))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144061
GeneSymbolCOPB1
Binding site34,46
Score0.923
Seed1
Au0.353
Energy-22.4
Binding len12
Me-6.908
Phylopstem1.8991950272727272
Phylopflank1.9706857787499996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure