Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCCGCGCCTCGGCCCCATGGACGCCCTGTGCGGT
(((((((.((((((((((((.&)))))))))))))).....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144070
GeneSymbolABCC3
Binding site33,74
Score0.846
Seed1
Au0.294
Energy-23.9
Binding len41
Me-6.251
Phylopstem-0.5925033000000001
Phylopflank0.07145990695652171
Longest consecutive pairings14
Position of longest consecutive pairings27
Pairings in 3prime end7
Position5UTR
2D Structure