Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCAACCGCAAGACTGTTGCC
..(((((((((((((...(((&)))..)))))))).....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144072
GeneSymbolUBAC2
Binding site1225,1249
Score0.923
Seed1
Au0.485
Energy-20.2
Binding len24
Me-5.19
Phylopstem0.3521077333333333
Phylopflank0.5961172562499999
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure