Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGGCATCACTGCAGCTAGTAAT
((((((((((((((((((((.&))))).))..))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144072
GeneSymbolUBAC2
Binding site405,430
Score0.923
Seed1
Au0.544
Energy-19.7
Binding len25
Me-3.938
Phylopstem2.2119235625
Phylopflank3.866808524999999
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure