Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAACCGGGGCTGCGGT
((((((((.((((((((....&)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144073
GeneSymbolCHORDC1
Binding site110,128
Score1.0
Seed1
Au0.441
Energy-27.1
Binding len18
Me-4.994
Phylopstem0.7312918375
Phylopflank-0.0032224275000000066
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure