Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTACACATTTTTACTTATATGGGGTTGCCAGA
..((((((..(..((((((((.&)))))))).................)..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144382
GeneSymbolPLCL2
Binding site3847,3882
Score1.0
Seed1
Au0.574
Energy-17.4
Binding len35
Me-11.892
Phylopstem0.272076525
Phylopflank0.8834921062499997
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end7
Position3UTR
2D Structure