Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCCTTGGAAGGCATTGTTTCTTTACCAGTTACATTCTGCAGTTGTG
..((((((((((.((((((((&.)))..)))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144663
GeneSymbolCDH17
Binding site2353,2403
Score1.0
Seed1
Au0.544
Energy-21.2
Binding len24
Me-6.246
Phylopstem1.7095361000000004
Phylopflank1.2687021837499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure