Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCCCACCTCTTCTCTTCTGCTTCCATATTACAGGTCTCCTCAGTTGCGAA
(((((((((.((((((((...&.))))))....)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144756
GeneSymbolNPFFR2
Binding site243,299
Score1.0
Seed1
Au0.632
Energy-18.3
Binding len24
Me-5.18
Phylopstem0.34017055555555553
Phylopflank0.16595233175
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure