Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTCAGCTCGCGAGCGCAGCTGCGGCTGCGAG
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366890
GeneSymbolDENND5B
Binding site10,44
Score0.846
Seed1
Au0.221
Energy-28.3
Binding len18
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure