Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAAAGTTTAACATGAACTAACATTTCTGCACTGTAACGTGCCGGGC
.(((((((((((.((((((...&.)))))).)))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144769
GeneSymbolDST
Binding site17481,17528
Score0.808
Seed1
Au0.574
Energy-22.6
Binding len23
Me-5.082
Phylopstem4.904459907142857
Phylopflank4.997527721249998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure