Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCGGCATCTTAGAAGACGAGTTGCAGCGGCCGCAGCTGCC
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144769
GeneSymbolDST
Binding site472,516
Score1.0
Seed1
Au0.382
Energy-28.4
Binding len16
Me-4.957
Phylopstem0.6548309142857143
Phylopflank1.6392612075000002
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure