Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATCGTGGGACTCTACAGTGAAGGTGTGGTCTGGTGTTCCTGCAGAGATGCCAGGC
.((((((((.(..(((((....&.)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144772
GeneSymbolNSMAF
Binding site2338,2398
Score0.923
Seed1
Au0.456
Energy-21.5
Binding len18
Me-9.672
Phylopstem5.156639875000001
Phylopflank4.63580155
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure